aaanalysis.SeqMut

class aaanalysis.SeqMut(verbose=False)[source]

Bases: object

UNDER CONSTRUCTION - Sequence Mutator (SeqMut) class for analyzing the impact of amino acid substitutions in protein sequences.

Methods

fit([name, from_aa, to_aa])

Compute difference between amino acids for given property scale.

scan([df_seq, jmd_n_len, jmd_c_len, show_delta])

Make single position mutational scan for all existing amino acids for each sequence in df_seq using the average prediction for each model (already fitted).