aaanalysis.AAMutPlot

class aaanalysis.AAMutPlot(verbose=False, df_scales=None)[source]

Bases: object

UNDER CONSTRUCTION - Plotting class for AAMut (Amino Acid Mutator).

Added in version 1.0.0.

Methods

aa_comparison()

Plot the pairwise amino acid comparison.

scale_ranking()

Plot the per-scale ranking of substitution impact.

substitution_matrix()

Plot the amino acid substitution impact matrix.
__init__(verbose=False, df_scales=None)[source]
Parameters:

  • verbose (bool, default=False) – If True, verbose outputs are enabled.

  • df_scales (pd.DataFrame, shape (n_letters, n_scales), optional) – DataFrame of amino acid scales. Default from load_scales().